Problem with pbs node configuration
Giorgio Padoan
gpadoan at inogs.it
Mon Aug 4 09:04:51 EDT 2008
Hello people,
I am testing mpiexec 0.83 on my little cluster (10 nodes with Intel Quad-Core plus an front-end Intel Dual-Core).
On it I installed:
Torque-2.4.0-snap.200804241119
Maui-3.2.6p20-snap.1182974819
Mpich2-1.0.7
and, now, they work fine.
I have compiled mpiexec with:
./configure --prefix=/opt/mpich/mpiexec-0.83 --with-pbs=/opt/torque/2.4.0/ --disable-mpich-gm --with-default-comm=mpich2 \
--disable-mpich-ib --disable-mpich-rai --disable-lam --disable-shmem --disable-emp --disable-portals \
--with-mpicc=/opt/mpich/2-1.0.7/bin/mpicc --with-mpif77=/opt/mpich/2-1.0.7/bin/mpif77 --with-sed=/bin/sed
If I try for mpiexec (Mpiexec-0.83) I get the following.
When I run the job:
#PBS -l nodes=2:ppn=2
qsub -q batch ./go_mpiexec
where script "go_mpiexec" is:
/opt/mpich/mpiexec-0.83/bin/mpiexec -verbose --comm=mpich2 /home/giorgio/job/test/wave_mpi/Bstagj2mpi
Ouput file of Mpich2 logs:
node 0: name <my-name>, cpu avail 1
ATT: must use at least 2 CPUs
I think that "mpiexec" do not see my /var/torque/server_priv/nodes file.
All the environments variable are correct in appearance.
Thanks for suggestions.
giorgio
--
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Giorgio Padoan gpadoan [at] inogs.it
The computer whisperer.
GDL-SIEG Supporto informatico e grafica computerizzata
Istituto Nazionale di Oceanografia e Geofisica Sperimentale - OGS
Borgo Grotta Gigante 42/c PHONE +39 40 2140265
34010 - TRIESTE (ITALIA) FAX +39 40 327521
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